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1

Optogenetics ||

Yawo, Hiromu, Kandori, Hideki, Koizumi, Amane

Year:

2015

Language:

english

File:

PDF, 15.74 MB

english, 2015

2

Role of internal water molecules in bacteriorhodopsin

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Year:

2000

Language:

english

File:

PDF, 671 KB

english, 2000

3

Chapter 2 Primary photochemical events in the rhodopsin molecule

Tôru Yoshizawa, Hideki Kandori

Journal:

Progress in Retinal Research

Year:

1991

Language:

english

File:

PDF, 1.81 MB

english, 1991

4

[AIP EXOPLANETS AND DISKS: THEIR FORMATION AND DIVERSITY: Proceedings of the International Conference - Kailua-Kona (Hawaii) (9–12 March 2009)] AIP Conference Proceedings - HiCIAO: A High-contrast Instrument for the Next Generation Subaru Adaptive Optics

Suzuki, Ryuji, Tamura, Motohide, Suto, Hiroshi, Morino, Jun-ichi, Hashimoto, Jun, Kudo, Tomoyuki, Kandori, Ryo, Murakami, Naoshi, Nishikawa, Jun, Ukita, Nobuharu, Takami, Hideki, Guyon, Olivier, Nishi

Year:

2009

Language:

english

File:

PDF, 1.74 MB

english, 2009

5

Effect of Temperature and Hydration Level on Purple Membrane Dynamics Studied Using Broadband Dielectric Spectroscopy from Sub-GHz to THz Regions

Yamamoto, Naoki, Ito, Shota, Nakanishi, Masahiro, Chatani, Eri, Inoue, Keiichi, Kandori, Hideki, Tominaga, Keisuke

Journal:

Journal of Physical Chemistry B

Year:

2018

Language:

english

File:

PDF, 1.32 MB

english, 2018

6

2P274 1A1435 Time-resolved FT-IR measurement of X-D stretching vibrations of Bacteriorhodopsin in micro- to milli- second time range(The 48th Annual Meeting of the Biophysical Society of Japan)

Furutani, Yuji, Lorentz-Fonfria, Victor, Kandori, Hideki

Journal:

Seibutsu Butsuri

Year:

2010

Language:

english

File:

PDF, 232 KB

english, 2010

7

Why Is the Cytoplasm Upper Side in Rhodopsin? On the Occasion of Dr. Richard Henderson’s Nobel Prize; なぜロドプシンは細胞質側が上なのか？Richard Henderson氏のノーベル賞に寄せて;

KANDORI, Hideki

Journal:

Seibutsu Butsuri

Year:

2018

File:

PDF, 487 KB

2018

8

Active Learning of Bayesian Linear Models with High-Dimensional Binary Features by Parameter Confidence-Region Estimation

Inatsu, Yu, Karasuyama, Masayuki, Inoue, Keiichi, Kandori, Hideki, Takeuchi, Ichiro

Journal:

Neural Computation

Year:

2020

File:

PDF, 1.25 MB

2020

9

Clay Mimics Color Tuning in Visual Pigments

Yuji Furutani, Kazutomo Ido, Masako Sasaki, Makoto Ogawa, Hideki Kandori

Journal:

Angewandte Chemie

Year:

2007

Language:

english

File:

PDF, 469 KB

english, 2007

10

Color Change of Proteorhodopsin by a Single Amino Acid Replacement at a Distant Cytoplasmic Loop

Maiko Yoshitsugu, Mikihiro Shibata, Daisuke Ikeda, Yuji Furutani, Hideki Kandori

Journal:

Angewandte Chemie

Year:

2008

Language:

english

File:

PDF, 430 KB

english, 2008

11

An FTIR Study of Monkey Green- and Red-Sensitive Visual Pigments

Kota Katayama, Yuji Furutani, Hiroo Imai, Hideki Kandori

Journal:

Angewandte Chemie

Year:

2010

Language:

english

File:

PDF, 646 KB

english, 2010

12

Structural Changes in Bacteriorhodopsin in Response to Alternate Illumination Observed by High-Speed Atomic Force Microscopy

Dr. Mikihiro Shibata, Prof. Dr. Takayuki Uchihashi, Dr. Hayato Yamashita, Prof. Dr. Hideki Kandori, Prof. Dr. Toshio Ando

Journal:

Angewandte Chemie

Year:

2011

Language:

english

File:

PDF, 677 KB

english, 2011

13

Clay Mimics Color Tuning in Visual Pigments

Yuji Furutani, Kazutomo Ido, Masako Sasaki, Makoto Ogawa, Hideki Kandori

Journal:

Angewandte Chemie International Edition

Year:

2007

Language:

english

File:

PDF, 468 KB

english, 2007

14

Color Change of Proteorhodopsin by a Single Amino Acid Replacement at a Distant Cytoplasmic Loop

Maiko Yoshitsugu, Mikihiro Shibata, Daisuke Ikeda, Yuji Furutani, Hideki Kandori

Journal:

Angewandte Chemie International Edition

Year:

2008

Language:

english

File:

PDF, 430 KB

english, 2008

15

An FTIR Study of Monkey Green- and Red-Sensitive Visual Pigments

Kota Katayama, Yuji Furutani, Hiroo Imai, Hideki Kandori

Journal:

Angewandte Chemie International Edition

Year:

2010

Language:

english

File:

PDF, 646 KB

english, 2010

16

Structural Changes in Bacteriorhodopsin in Response to Alternate Illumination Observed by High-Speed Atomic Force Microscopy

Dr. Mikihiro Shibata, Prof. Dr. Takayuki Uchihashi, Dr. Hayato Yamashita, Prof. Dr. Hideki Kandori, Prof. Dr. Toshio Ando

Journal:

Angewandte Chemie International Edition

Year:

2011

Language:

english

File:

PDF, 667 KB

english, 2011

17

Magnetic and Infrared Properties of the Azide Complex of (2,7,12,17-Tetrapropylporphycenato)iron(III): A Novel Admixing Mechanism of the S = 5/2 and S = 3/2 States

Saburo Neya, Akihiro Takahashi, Hirotaka Ode, Tyuji Hoshino, Masayuki Hata, Akira Ikezaki, Yoshiki Ohgo, Masashi Takahashi, Hirotsugu Hiramatsu, Teizo Kitagawa, Yuji Furutani, Hideki Kandori, Noriaki

Journal:

European Journal of Inorganic Chemistry

Year:

2007

Language:

english

File:

PDF, 147 KB

english, 2007

18

Subpicosecond transient absorption spectrum of the excited state of a retinal protein, halorhodopsin

Hideki Kandori, Keitaro Yoshihara, Hiroaki Tomioka, Hiroyuki Sasabe

Journal:

Chemical Physics Letters

Year:

1991

Language:

english

File:

PDF, 383 KB

english, 1991

19

Comparative study of primary photochemical events of two retinal proteins, bacteriorhodopsin and halorhodopsin, by use of subpicosecond time-resolved spectroscopy

Hideki Kandori, Keitaro Yoshihara, Hiroaki Tomioka, Hiroyuki Sasabe, Yoshinori Shichida

Journal:

Chemical Physics Letters

Year:

1993

Language:

english

File:

PDF, 603 KB

english, 1993

20

Excited-state dynamics of a protonated Schiff base of all-trans retinal in methanol probed by femtosecond fluorescence measurement

Hideki Kandori, Hiroyuki Sasabe

Journal:

Chemical Physics Letters

Year:

1993

Language:

english

File:

PDF, 4.08 MB

english, 1993

21

Influence of the adsorption of citrate and tartrate ions upon the formation of γ-FeOOH particles

Tatsuo Ishikawa, Hideki Nishimori, Ikuo Abe, Kazuhiko Kandori

Journal:

Colloids and Surfaces A: Physicochemical and Engineering Aspects

Year:

1993

Language:

english

File:

PDF, 1.04 MB

english, 1993

22

Strongly hydrogen-bonded water molecule is observed only in the alkaline form of proteorhodopsin

Yuji Furutani, Daisuke Ikeda, Mikihiro Shibata, Hideki Kandori

Journal:

Chemical Physics

Year:

2006

Language:

english

File:

PDF, 148 KB

english, 2006

23

Internal water molecules of light-driven chloride pump proteins

Mikihiro Shibata, Norikazu Muneda, Kunio Ihara, Takanori Sasaki, Makoto Demura, Hideki Kandori

Journal:

Chemical Physics Letters

Year:

2004

Language:

english

File:

PDF, 314 KB

english, 2004

24

Unique temperature dependence in the adduct formation between FMN and cysteine S-H group in the LOV2 domain of Adiantum phytochrome3

Dai Nozaki, Tatsuya Iwata, Satoru Tokutomi, Hideki Kandori

Journal:

Chemical Physics Letters

Year:

2005

Language:

english

File:

PDF, 258 KB

english, 2005

25

Deprotonation of Glu234 during the photocycle of Natronomonas pharaonis halorhodopsin

Mikihiro Shibata, Yuko Saito, Makoto Demura, Hideki Kandori

Journal:

Chemical Physics Letters

Year:

2006

Language:

english

File:

PDF, 223 KB

english, 2006

26

Quantum yields for the light adaptations in Anabaena sensory rhodopsin and bacteriorhodopsin

Yoichiro Wada, Akira Kawanabe, Yuji Furutani, Hideki Kandori, Hiroyuki Ohtani

Journal:

Chemical Physics Letters

Year:

2008

Language:

english

File:

PDF, 301 KB

english, 2008

27

Water structural changes in the activation process of the LOV2 domain of Adiantum phytochrome3

Dai Nozaki, Tatsuya Iwata, Satoru Tokutomi, Hideki Kandori

Journal:

Journal of Molecular Structure

Year:

2005

Language:

english

File:

PDF, 236 KB

english, 2005

28

Photoisomerization of the rhodopsin chromophore in clay interlayers at 77 K

Hideki Kandori, Toshio Ichioka, Masako Sasaki

Journal:

Chemical Physics Letters

Year:

2002

Language:

english

File:

PDF, 103 KB

english, 2002

29

An inward proton transport using anabaena sensory rhodopsin

Akira Kawanabe, Yuji Furutani, Kwang-Hwan Jung, Hideki Kandori

Journal:

Journal of Microbiology

Year:

2011

Language:

english

File:

PDF, 192 KB

english, 2011

30

Femtosecond intermolecular electron transfer in diffusionless, weakly polar systems: nile blue in aniline and N,N-dimethylaniline

Tohru Kobayashi, Yoshihiro Takagi, Hideki Kandori, Klaus Kemnitz, Keitaro Yoshihara

Journal:

Chemical Physics Letters

Year:

1991

Language:

english

File:

PDF, 626 KB

english, 1991

31

Femtosecond intermolecular electron transfer in condensed systems

Keitaro Yoshihara, Yutaka Nagasawa, Arkadiy Yartsev, Shigeichi Kumazaki, Hideki Kandori, Alan E. Johnson, Keisuke Tominaga

Journal:

Journal of Photochemistry and Photobiology A: Chemistry

Year:

1994

Language:

english

File:

PDF, 654 KB

english, 1994

32

Excited-state dynamics of rhodopsin probed by femtosecond fluorescence spectroscopy

Hideki Kandori, Yuji Furutani, Shoko Nishimura, Yoshinori Shichida, Haik Chosrowjan, Yutaka Shibata, Noboru Mataga

Journal:

Chemical Physics Letters

Year:

2001

Language:

english

File:

PDF, 136 KB

english, 2001

33

Transmembrane Signaling Mediated by Water in Bovine Rhodopsin

Shoko Nishimura, Hideki Kandori, Akio Maeda

Journal:

Photochemistry and Photobiology

Year:

1997

Language:

english

File:

PDF, 588 KB

english, 1997

34

Protein–Protein Interaction of a Pharaonis Halorhodopsin Mutant Forming a Complex with Pharaonis Halobacterial Transducer Protein II Detected by Fourier-Transform Infrared Spectroscopy

Yuji Furutani, Motohiro Ito, Yuki Sudo, Naoki Kamo, Hideki Kandori

Journal:

Photochemistry and Photobiology

Year:

2008

Language:

english

File:

PDF, 461 KB

english, 2008

35

High-speed atomic force microscopy shows dynamic molecular processes in photoactivated bacteriorhodopsin

Shibata, Mikihiro, Yamashita, Hayato, Uchihashi, Takayuki, Kandori, Hideki, Ando, Toshio

Journal:

Nature Nanotechnology

Year:

2010

Language:

english

File:

PDF, 1.64 MB

english, 2010

36

Characterization of Magnetic Markers for Liquid-Phase Immunoassays Using Brownian Relaxation

Enpuku, Keiji, Watanabe, Hideki, Higuchi, Yuichi, Yoshida, Takashi, Kuma, Hiroyuki, Hamasaki, Naotaka, Mitsunaga, Masakazu, Kanzaki, Hisao, Kandori, Akihiko

Journal:

Japanese Journal of Applied Physics

Year:

2012

Language:

english

File:

PDF, 854 KB

english, 2012

37

Primary Processes During the Light-signal Transduction of Phototropin

Daisuke Matsuoka, Tatsuya Iwata, Kazunori Zikihara, Hideki Kandori, Satoru Tokutomi

Journal:

Photochemistry and Photobiology

Year:

2007

File:

PDF, 620 KB

2007

38

Primary Processes During the Light-signal Transduction of Phototropin

Daisuke Matsuoka, Tatsuya Iwata, Kazunori Zikihara, Hideki Kandori, Satoru Tokutomi

Journal:

Photochemistry and Photobiology

Year:

2007

Language:

english

File:

PDF, 1.07 MB

english, 2007

39

Manipulation of protein-complex function by using an engineered heterotrimeric coiled-coil switch

Mizuno, Toshihisa, Suzuki, Kumiko, Imai, Tatsuya, Kitade, Yuya, Furutani, Yuji, Kudou, Motonori, Oda, Masayuki, Kandori, Hideki, Tsumoto, Kouhei, Tanaka, Toshiki

Journal:

Organic & Biomolecular Chemistry

Year:

2009

Language:

english

File:

PDF, 428 KB

english, 2009

40

DEPENDENCY OF APPARENT RELATIVE QUANTUM YIELD OF ISORHODOPSIN TO RHODOPSIN ON THE PHOTON DENSITY OF PICOSECOND LASER PULSE

Hideki Kandori, Sinzi Matuoka, Hiroshi Nagai, Yoshinori Shichida, Tôru Yoshizawa

Journal:

Photochemistry and Photobiology

Year:

1988

Language:

english

File:

PDF, 457 KB

english, 1988

41

DEPENDENCY OF PHOTON DENSITY ON PRIMARY PROCESS OF CATTLE RHODOPSIN

HIDEKI KANDORI, SINZI MATUOKA, YOSHINORI SHICHIDA, TÔCRU YOSHIZAWA

Journal:

Photochemistry and Photobiology

Year:

1989

Language:

english

File:

PDF, 416 KB

english, 1989

42

Diversity and functional analysis of proteorhodopsin in marine Flavobacteria

Susumu Yoshizawa, Akira Kawanabe, Hiroyasu Ito, Hideki Kandori, Kazuhiro Kogure

Journal:

Environmental Microbiology

Year:

2012

Language:

english

File:

PDF, 298 KB

english, 2012

43

Transformation of Time-Resolved Spectra to Lifetime-Resolved Spectra by Maximum Entropy Inversion of the Laplace Transform

Lórenz-Fonfría, Víctor A., Kandori, Hideki

Journal:

Applied Spectroscopy

Year:

2006

Language:

english

File:

PDF, 279 KB

english, 2006

44

Practical Aspects of the Maximum Entropy Inversion of the Laplace Transform for the Quantitative Analysis of Multi-Exponential Data

Lórenz-Fonfría, Víctor A., Kandori, Hideki

Journal:

Applied Spectroscopy

Year:

2007

Language:

english

File:

PDF, 382 KB

english, 2007

45

Bayesian Maximum Entropy (Two-Dimensional) Lifetime Distribution Reconstruction from Time-Resolved Spectroscopic Data

Lórenz-Fonfría, Victor A., Kandori, Hideki

Journal:

Applied Spectroscopy

Year:

2007

Language:

english

File:

PDF, 703 KB

english, 2007

46

Inter-helical Hydrogen Bonds Are Essential Elements for Intra-protein Signal Transduction: The Role of Asp115 in Bacteriorhodopsin Transport Function

Alex Perálvarez-Marín, Víctor A. Lórenz-Fonfría, José-Luís Bourdelande, Enric Querol, Hideki Kandori, Esteve Padrós

Journal:

Journal of Molecular Biology

Year:

2007

Language:

english

File:

PDF, 1.01 MB

english, 2007

47

Effects of Chloride Ion Binding on the Photochemical Properties of Salinibacter Sensory Rhodopsin I

Daisuke Suzuki, Yuji Furutani, Keiichi Inoue, Takashi Kikukawa, Makoto Sakai, Masaaki Fujii, Hideki Kandori, Michio Homma, Yuki Sudo

Journal:

Journal of Molecular Biology

Year:

2009

Language:

english

File:

PDF, 2.27 MB

english, 2009

48

Corrigendum to “Effects of Chloride Ion Binding on the Photochemical Properties of Salinibacter Sensory Rhodopsin I” [J. Mol. Biol. (2009) 392, 48–61]

Daisuke Suzuki, Yuji Furutani, Keiichi Inoue, Takashi Kikukawa, Makoto Sakai, Masaaki Fujii, Hideki Kandori, Michio Homma, Yuki Sudo

Journal:

Journal of Molecular Biology

Year:

2010

Language:

english

File:

PDF, 382 KB

english, 2010

49

Rates of Primary Electron Transfer Reactions in the Photosystem I Reaction Center Reconstituted with Different Quinones as the Secondary Acceptor

Kumazaki, Shigeichi, Iwaki, Masayo, Ikegami, Isamu, Kandori, Hideki, Yoshihara, Keitaro, Itoh, Shigeru

Journal:

Journal of Physical Chemistry

Year:

1994

Language:

english

File:

PDF, 745 KB

english, 1994

50

Absorption Spectra and Photochemical Reactions in a Unique Photoactive Protein, Middle Rhodopsin MR

Inoue, Keiichi, Reissig, Louisa, Sakai, Makoto, Kobayashi, Shiori, Homma, Michio, Fujii, Masaaki, Kandori, Hideki, Sudo, Yuki

Journal:

Journal of Physical Chemistry B

Year:

2012

Language:

english

File:

PDF, 4.61 MB

english, 2012

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